SNP Report for TSC0363870

Basic Information

Characterized by: Sanger Center, Cambridge
Laboratory Internal ID: scsnp-AL137795.9_35135
dbSNP Acc# 1383206
Submit Date: 12 Jul 2000
Release Date:
Confirmed: n/a

Characterized by:	Sanger Center, Cambridge
Laboratory Internal ID:	scsnp-AL137795.9_35135
dbSNP Acc#	1383206
Submit Date:	12 Jul 2000
Release Date:
Confirmed:	n/a

Screening Data

Consensus Sequence (Clique cliq:326988 )

tggcttaaaa atgcaaaata tgttcaataa gagtgacctc cttgacctac tcRctagaga aaagtgagga caaagtgata gtaacagcga tggccttgtc tttacttgtt ctaaccccag atctttgatc ctttgcatgc tcagggttct ttgatgagaa tcctcaagat gatgggggct gaaatccacc ggggccttcc agcctctcac ccacaggaca gagcctgcca ggcaggtgtg atccacagct cgacctgcat ggggacaaca gttggcatct ataaggccat ctgaatactg tgttggggac acagtattca tgacatactg acacagtgct ggggacagct aaccatctga gcaaagactc catggataat ttgaaagata tctggtcttt gtatctggtt cctgacccag agcttcaaaa acccttagaa tatcctaatg ataggagtat ctttgttatg ctaatgaggt gaatcatggc gggctcctag atagctccag gagggggctg gtcaccagaa agatcacgca tgtgacctgc ggtggggaag ggttgagatt gaattcaatc ccttgtccca a

**Key**
Ornamentation	Ambiguity Codes
This Polymorphism	M	a/c	V	a/c/g
Other Polymorphism (link)	N	a/c/g/t	H	a/c/t
Repeat masked region	R	a/g	D	a/g/t
Mapping Primer	W	a/t	S	c/g
Confirmation Primer	B	c/g/t	Y	c/t
	K	g/t

Details

Tracefile Position Reversed
p1_0t378f07.q1cSCF 96 no

AL137795 (genomic alignment) 35135 no
Allele Times seen
a 1

g 1
View Traces
View Assembly

In Silico Mapping

Band	GenBank Entry	Contig	Chrom
1p36.31-1p36.33	AL137795.10	NT_000002	Chr1
Relative Position	33893	234039	8567.0 kb

BLAST Results

Accession#	Pval	Cliq_begin	Cliq_end	Acc_begin	Acc_end	Description
AL137795.10	9.50e-78	-81	187	33878	34027	Human DNA sequence from clone RP5-1096P7 on chromosome 1p36.31-36.33, complete sequence.

Radiation Hybrid Mapping

Not RH mapped

Protocols

Production Protocol
Detection Protocol

snp-info@snp.cshl.org (database questions)

aholden@earthlink.net (TSC questions)